Publications Relating to InfectX/TargetInfectX

2014

    • Liberali, P., Snijder, B. and Pelkmans, L. (2014)

      A hierarchical map of regulatory genetic interactions in membrane trafficking. Cell 157, 1473-87.

    • Omasits, U., Ahrens, C.H., Müller, S., Wollscheid, B. (2014)

      Protter: interactive protein feature visualization and integration with experimental proteomic data. Bioinformatics. 30(6):884-6.

    • Stekhoven, D.J., Omasits, U., Quebatte, M., Dehio, C., Ahrens, C.H. (2014)

      Proteome-wide identification of predominant subcellular protein localizations in a bacterial model organism. J. Proteomics 99:123-37.

    • Franceschini, A., Meier, R., Casanova, A., Kreibich, S., Daga, N., Andritschke, D., Dilling, S., Rämö, P., Emmenlauer, M., Kaufmann, A., Conde-Álvarez, R., Low, S.H., Pelkmans, L., Helenius, A., Hardt, W.D., Dehio, C., von Mering, C. (2014)

      Specific inhibition of diverse pathogens in human cells by synthetic microRNA-like oligonucleotides inferred from RNAi screens. Proc. Natl. Acad. Sci. U. S. A. 111:4548-53.

    • Kühbacher, A., Novy K., Sachse M., Nilges-Moya M., Wollscheid B., Cossart P., Pizarro-Cerdá J. (2014)

      Late endosomal compartments control Listeria monocytogenes cell entry and vacuolar escape. submitted.

    • Liu, Y., Chen., J., Sethi, A., Li, Q.K., Chen, L., Collins, B., Gillet, L.C., Wollscheid, B., Zhang, H., Aebersold, R. (2014)

      Glycoproteomic analysis of prostate cancer tissues by SWATH mass spectrometry discovers N-acylethanolamine acid amidase and protein tyrosine kinase 7 as signatures for tumor aggressiveness. Mol. Cell. Proteomics. PMID: 24741114 [Epub ahead of print]

    • Meier, R., Franceschini, A., Horvath, P., Tetard, M., Mancini, R., von Mering, C., Helenius, A., Lozach, P.Y. (2014)

      Genome-wide siRNA screens reveal VAMP3 as a novel host factor required for Uukuniemi virus late penetration. J Virol. 88:8565-8578

    • Rämö P.*, Drewek A.,* Arrieumerlou C., Beerenwinkel N., Ben-Tekaya H., Bühlmann P., Cardel B., Casanova A., Conde R., Cossart P., Csúcs G., Eicher S., Emmenlauer M., Greber U., Hardt W.D., Helenius A., Kannan A., Kasper C., Kaufmann A., Kreibich S., Kühbacher A., Low S., Mercer J., Mudrak D., Muntwiler S., Pelkmans L., Pizarro-Cerdá J., Pujadas E., Rinn B., Schmich F., Siebourg J., Snijder B., Stebler M., Studer G., Szczurek E., Truttmann M., von Mering C., Vonderheit A., Dehio C. (2014)

      Parallel Mixed Model for Simultaneous Analysis of Multiple Large-Scale RNAi Screens submitted

    • Schmich, F., Szczurek, E., Kreibich, S., Dilling, S., Andritschke, D., Casanova, A., Low, S.H., Eicher, S., Muntwiler, S., Emmenlauer, M., Rämö, P., Conde-Alvarez, R., von Mering, C., Hardt, W.-D., Dehio C., and Beerenwinkel, N. (2014)

      Deconvoluting off-target-confounded RNA interference screens in revision

    • Siebourg-Polster, J., Mudrak, D., Emmenlauer, M., Rämö, P., Dehio, C., Greber, U., Fröhlich, H., Beerenwinkel N. (2014)

      NEMix: Single-cell nested effects models for probabilistic pathway stimulation. submitted

2013 publications

2012, 2011, 2010 publications